Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 AC055748.1-201ENST00000489836 959 ntBASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 AC079140.1-201ENST00000508039 487 ntBASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 KRT8P48-201ENST00000515599 1220 ntBASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 AC105233.2-201ENST00000523697 349 ntBASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 AF228730.5-201ENST00000530288 346 ntBASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB13Q9Y5F0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 TIMM8BP1-201ENST00000452384 211 ntBASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 AC087272.1-201ENST00000523624 533 ntBASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 KRT8P23-201ENST00000560090 1207 ntBASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB13Q9Y5F0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB13Q9Y5F0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms