Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
TRAPPC4Q9Y296 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 PMS2P7-201ENST00000506558 1336 ntBASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 MIR940-201ENST00000401276 94 ntBASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AC092474.2-201ENST00000424288 719 ntBASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 PGAM5P1-201ENST00000518923 814 ntBASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AL009183.1-201ENST00000603760 355 ntBASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AC020765.3-201ENST00000613051 740 ntBASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AC092865.6-201ENST00000642101 219 ntBASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAPPC4Q9Y296 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 AL031731.1-201ENST00000642131 2094 ntBASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAPPC4Q9Y296 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AL009178.2-201ENST00000597278 2719 ntBASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AL596087.1-201ENST00000400979 1969 ntBASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 AC002056.1-201ENST00000395613 760 ntBASIC14.95□□□□□ -0.02
TRAPPC4Q9Y296 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms