Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 AC131009.4-201ENST00000624048 1740 ntBASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 CYP2T1P-202ENST00000641596 2535 ntBASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 WASH4P-201ENST00000564273 1246 ntBASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SORCS3Q9UPU3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AC006449.5-201ENST00000610658 2098 ntBASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 PCDHA1-201ENST00000378133 2726 ntBASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 SPDYE19P-201ENST00000338590 713 ntBASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 PRYP6-201ENST00000514804 343 ntBASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 CHCHD2P3-201ENST00000603038 451 ntBASIC17.11■□□□□ 0.33
SORCS3Q9UPU3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms