Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.25■□□□□ 0.51
COL20A1Q9P218 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL20A1Q9P218 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 Z97205.2-201ENST00000564697 1639 ntBASIC18.24■□□□□ 0.51
COL20A1Q9P218 AC006449.6-201ENST00000612330 2296 ntBASIC18.24■□□□□ 0.51
COL20A1Q9P218 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 AC027307.3-201ENST00000594262 1100 ntBASIC18.24■□□□□ 0.51
COL20A1Q9P218 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL20A1Q9P218 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL20A1Q9P218 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.23■□□□□ 0.51
COL20A1Q9P218 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 AC098850.1-201ENST00000419919 790 ntBASIC18.23■□□□□ 0.51
COL20A1Q9P218 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 TPRX2P-201ENST00000535362 881 ntBASIC18.23■□□□□ 0.51
COL20A1Q9P218 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL20A1Q9P218 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.23■□□□□ 0.51
COL20A1Q9P218 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL20A1Q9P218 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.22■□□□□ 0.51
COL20A1Q9P218 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms