Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 AL139400.1-201ENST00000366220 510 ntBASIC17.32■□□□□ 0.36
CISHQ9NSE2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 HLA-J-203ENST00000494367 1087 ntBASIC17.32■□□□□ 0.36
CISHQ9NSE2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 AP001059.3-201ENST00000619053 235 ntBASIC17.32■□□□□ 0.36
CISHQ9NSE2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CISHQ9NSE2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CISHQ9NSE2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 HAUS4P1-201ENST00000406739 1145 ntBASIC17.31■□□□□ 0.36
CISHQ9NSE2 TSEN15P1-201ENST00000423257 515 ntBASIC17.31■□□□□ 0.36
CISHQ9NSE2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 AC109322.1-201ENST00000524499 1264 ntBASIC17.31■□□□□ 0.36
CISHQ9NSE2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 AC018529.1-201ENST00000613063 361 ntBASIC17.31■□□□□ 0.36
CISHQ9NSE2 LINC00628-201ENST00000628516 1289 ntBASIC17.31■□□□□ 0.36
CISHQ9NSE2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CISHQ9NSE2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CISHQ9NSE2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CISHQ9NSE2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.3■□□□□ 0.36
CISHQ9NSE2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms