Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 PPT1-215ENST00000641471 2368 ntBASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 SAPCD2P3-201ENST00000455031 850 ntBASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 OR7E14P-202ENST00000530490 1290 ntBASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 MIR1199-201ENST00000621445 119 ntBASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE2Q9NRR3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 AC068418.2-201ENST00000577309 3703 ntBASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 AP003680.1-201ENST00000598970 3660 ntBASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 MRPL20P1-201ENST00000400819 433 ntBASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 PMS2P4-201ENST00000412466 1052 ntBASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 KRT18P35-201ENST00000510488 1269 ntBASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 MIR3909-201ENST00000579518 119 ntBASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE2Q9NRR3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms