Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.83■□□□□ 0.61
VAT1LQ9HCJ6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VAT1LQ9HCJ6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
VAT1LQ9HCJ6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VAT1LQ9HCJ6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VAT1LQ9HCJ6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAT1LQ9HCJ6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 AC099398.1-201ENST00000567919 2776 ntBASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 AC011467.4-201ENST00000594891 528 ntBASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 AL592424.1-201ENST00000563624 1536 ntBASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VAT1LQ9HCJ6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AL589739.1-201ENST00000607720 493 ntBASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AL138828.2-201ENST00000615812 383 ntBASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 SPDYE12P-201ENST00000618416 771 ntBASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 AC073592.8-201ENST00000624126 511 ntBASIC18.81■□□□□ 0.6
VAT1LQ9HCJ6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms