Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AL031284.1-201ENST00000419297 478 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AC092910.1-201ENST00000482027 1129 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AL160237.2-201ENST00000556165 472 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AC091167.2-201ENST00000579581 588 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AC117500.6-201ENST00000624871 588 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 PGM5P2-202ENST00000637225 1043 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AL139011.1-202ENST00000642063 584 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 SLC22A20-204ENST00000530038 1673 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AC131009.4-201ENST00000624048 1740 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 SNX33P1-201ENST00000592116 1762 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AC132872.4-202ENST00000622924 2756 ntBASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHRDL1Q9BU40 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 MRPL3P1-201ENST00000400109 1033 ntBASIC13□□□□□ -0.33
CHRDL1Q9BU40 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 AC108073.2-201ENST00000464002 357 ntBASIC13□□□□□ -0.33
CHRDL1Q9BU40 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHRDL1Q9BU40 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 MIR7706-201ENST00000613747 67 ntBASIC13□□□□□ -0.33
CHRDL1Q9BU40 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13□□□□□ -0.33
CHRDL1Q9BU40 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms