Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 AL590787.1-201ENST00000568856 1315 ntBASIC9.78□□□□□ -0.84
LIMD2Q9BT23 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LIMD2Q9BT23 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 HNRNPRP1-201ENST00000453465 1695 ntBASIC9.77□□□□□ -0.84
LIMD2Q9BT23 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 TOP3BP1-201ENST00000420768 1380 ntBASIC9.77□□□□□ -0.84
LIMD2Q9BT23 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC9.77□□□□□ -0.84
LIMD2Q9BT23 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AC092068.3-201ENST00000587894 2016 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 PI4KAP1-204ENST00000612579 1703 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AC106886.4-201ENST00000623557 2502 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 IPPK-202ENST00000375522 882 ntTSL 3 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 ATP6V0CP3-201ENST00000417255 467 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 FGFR3P6-201ENST00000457012 610 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AF186996.4-201ENST00000467186 377 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AC091167.2-201ENST00000579581 588 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AC004706.3-202ENST00000621574 984 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AL805961.1-202ENST00000641562 540 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AL139011.1-202ENST00000642063 584 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 LINC00895-201ENST00000629028 1637 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 AGGF1P2-201ENST00000426656 2106 ntBASIC9.77□□□□□ -0.85
LIMD2Q9BT23 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LIMD2Q9BT23 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms