Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 RNU1-129P-201ENST00000384064 167 ntBASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 AC005237.2-201ENST00000434368 219 ntBASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 AL135744.1-201ENST00000565098 629 ntBASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 U1.21-201ENST00000580816 167 ntBASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 AC013467.2-201ENST00000605472 835 ntBASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 PAUPAR-201ENST00000630360 2965 ntBASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
PCGF1Q9BSM1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 AC105917.1-201ENST00000506637 2539 ntBASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 KRT8P48-201ENST00000515599 1220 ntBASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 AC004449.1-201ENST00000564240 433 ntBASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 AC027612.4-201ENST00000605371 583 ntBASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 AL391256.1-201ENST00000443260 1855 ntBASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 AC006449.5-201ENST00000610658 2098 ntBASIC13.71□□□□□ -0.21
PCGF1Q9BSM1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.71□□□□□ -0.22
PCGF1Q9BSM1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms