Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFT43Q96FT9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
IFT43Q96FT9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 AC004835.2-201ENST00000603762 682 ntBASIC16.82■□□□□ 0.28
IFT43Q96FT9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 TCAF2P1-201ENST00000291129 2421 ntBASIC16.82■□□□□ 0.28
IFT43Q96FT9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.82■□□□□ 0.28
IFT43Q96FT9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 ALOX12P2-203ENST00000570921 1945 ntBASIC16.82■□□□□ 0.28
IFT43Q96FT9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFT43Q96FT9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 CYP2T1P-202ENST00000641596 2535 ntBASIC16.81■□□□□ 0.28
IFT43Q96FT9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 GGT3P-204ENST00000453783 1664 ntBASIC16.81■□□□□ 0.28
IFT43Q96FT9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 AC002056.1-201ENST00000395613 760 ntBASIC16.81■□□□□ 0.28
IFT43Q96FT9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 MIR3909-201ENST00000579518 119 ntBASIC16.81■□□□□ 0.28
IFT43Q96FT9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 GPAA1P2-202ENST00000606848 1787 ntBASIC16.81■□□□□ 0.28
IFT43Q96FT9 GGT4P-201ENST00000623672 1708 ntBASIC16.81■□□□□ 0.28
IFT43Q96FT9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
IFT43Q96FT9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFT43Q96FT9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
IFT43Q96FT9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFT43Q96FT9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms