Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP6V0A1Q93050 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 GK-202ENST00000378941 458 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 AL596325.1-201ENST00000563991 1082 ntBASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP6V0A1Q93050 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
ATP6V0A1Q93050 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 AL080243.2-201ENST00000418783 582 ntBASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 RN7SL692P-201ENST00000464677 288 ntBASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 REXO1L8P-201ENST00000604378 1897 ntBASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATP6V0A1Q93050 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 CR383656.12-201ENST00000549567 513 ntBASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms