Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.7■□□□□ 0.26
ATPAF2Q8N5M1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 AP000344.2-201ENST00000512987 629 ntBASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 LINC01225-203ENST00000563550 1244 ntBASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 FOXO1B-201ENST00000504678 1527 ntBASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATPAF2Q8N5M1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 MIR648-201ENST00000385046 94 ntBASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 AC005237.2-201ENST00000434368 219 ntBASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 AC018695.7-201ENST00000624587 2492 ntBASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATPAF2Q8N5M1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATPAF2Q8N5M1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms