Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AP005482.1-201ENST00000563722 1273 ntBASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AL109936.8-201ENST00000641772 604 ntBASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYNPOQ8N3V7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 FO393414.2-201ENST00000405153 598 ntBASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 TIMM17BP1-201ENST00000545713 516 ntBASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 CTBP2P3-201ENST00000585629 1255 ntBASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.46■□□□□ 0.23
SYNPOQ8N3V7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.46■□□□□ 0.22
SYNPOQ8N3V7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SYNPOQ8N3V7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.46■□□□□ 0.22
SYNPOQ8N3V7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SYNPOQ8N3V7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SYNPOQ8N3V7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.46■□□□□ 0.22
SYNPOQ8N3V7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 BOLA2P3-201ENST00000404566 256 ntBASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms