Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 AC246785.2-201ENST00000432512 513 ntBASIC16.47■□□□□ 0.23
PACS2Q86VP3 AC104819.1-201ENST00000504587 486 ntBASIC16.47■□□□□ 0.23
PACS2Q86VP3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 PRELID1P1-202ENST00000567272 903 ntBASIC16.47■□□□□ 0.23
PACS2Q86VP3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.47■□□□□ 0.23
PACS2Q86VP3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PACS2Q86VP3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 AC099521.3-201ENST00000624251 2938 ntBASIC16.46■□□□□ 0.23
PACS2Q86VP3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 LINC00167-201ENST00000530583 1419 ntBASIC16.46■□□□□ 0.23
PACS2Q86VP3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 AP003680.1-201ENST00000598970 3660 ntBASIC16.46■□□□□ 0.23
PACS2Q86VP3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 AC012615.1-201ENST00000565797 1299 ntBASIC16.46■□□□□ 0.23
PACS2Q86VP3 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 AC233702.3-201ENST00000578656 1387 ntBASIC16.46■□□□□ 0.23
PACS2Q86VP3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.46■□□□□ 0.23
PACS2Q86VP3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PACS2Q86VP3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PACS2Q86VP3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.46■□□□□ 0.22
PACS2Q86VP3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.46■□□□□ 0.22
PACS2Q86VP3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PACS2Q86VP3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PACS2Q86VP3 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PACS2Q86VP3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PACS2Q86VP3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms