Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AL160237.2-201ENST00000556165 472 ntBASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AC069148.1-201ENST00000608741 768 ntBASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AL732292.2-201ENST00000609649 430 ntBASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRTM1Q86UE6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 U82695.1-201ENST00000635752 1889 ntBASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 ATP5G2P1-201ENST00000433580 426 ntBASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRTM1Q86UE6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms