Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AC136604.1-201ENST00000418535 575 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 AL591846.1-201ENST00000451736 433 ntBASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 OARD1-212ENST00000482515 832 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS13BQ7Z7G8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 HINT2P1-201ENST00000419438 481 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 PFN1P12-201ENST00000455938 534 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 MIR4706-201ENST00000582134 82 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 CEP83-AS1-201ENST00000623122 2482 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 MIR6069-201ENST00000620069 79 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 CYP4F24P-201ENST00000586049 1580 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AL627389.1-201ENST00000413508 1182 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 FAM86LP-201ENST00000478302 853 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 HNRNPA1P13-201ENST00000510646 963 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 AC106872.11-201ENST00000605838 421 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 LINC01115-203ENST00000606068 577 ntBASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS13BQ7Z7G8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 AC018735.1-201ENST00000437208 1502 ntBASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13BQ7Z7G8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms