Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 AL592424.1-201ENST00000563624 1536 ntBASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 AC097359.3-201ENST00000603982 1210 ntBASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD4Q7Z3J3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 CEP164P1-201ENST00000455142 418 ntBASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 RN7SL713P-201ENST00000582127 302 ntBASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD4Q7Z3J3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 AC234644.1-201ENST00000406065 370 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 AC244157.2-201ENST00000616239 1006 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 LINC01144-201ENST00000626198 1710 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 PDIA3P2-201ENST00000428073 158 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 PHKG1P2-201ENST00000457537 863 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 AC103988.2-201ENST00000561804 725 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 PPY2P-201ENST00000582808 702 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 AL450472.2-201ENST00000603663 1156 ntBASIC20.06■□□□□ 0.8
RGPD4Q7Z3J3 COX6A1P2-201ENST00000620597 330 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms