Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 AC087481.3-201ENST00000602886 1894 ntBASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 AL390955.1-201ENST00000428694 934 ntBASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 LIN28AP1-201ENST00000429574 405 ntBASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP4Q6PIL6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 AC069224.1-201ENST00000566372 1715 ntBASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 TSPY14P-201ENST00000303979 915 ntBASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 AC093827.2-201ENST00000512654 315 ntBASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 AL355075.4-201ENST00000554988 638 ntBASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 AL023803.3-201ENST00000615559 522 ntBASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP4Q6PIL6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms