Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
C11orf88Q6PI97 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 COX5BP2-201ENST00000392354 334 ntBASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 AL031008.1-201ENST00000619963 541 ntBASIC14.29□□□□□ -0.12
C11orf88Q6PI97 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
C11orf88Q6PI97 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 AC104692.2-201ENST00000603054 253 ntBASIC14.28□□□□□ -0.12
C11orf88Q6PI97 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.28□□□□□ -0.12
C11orf88Q6PI97 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms