Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 AL109954.1-202ENST00000564051 2148 ntBASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 RBM17P3-201ENST00000417687 1192 ntBASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 PCED1CP-201ENST00000419887 785 ntBASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AL805961.1-202ENST00000641562 540 ntBASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 AC126755.1-201ENST00000525846 6405 ntBASIC11.16□□□□□ -0.62
LINC00242Q5T6M2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms