Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC93Q567U6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC93Q567U6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC93Q567U6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC93Q567U6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC93Q567U6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC93Q567U6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC93Q567U6 AL391256.1-201ENST00000443260 1855 ntBASIC19.84■□□□□ 0.77
CCDC93Q567U6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC93Q567U6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC93Q567U6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC93Q567U6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 AP001094.4-201ENST00000579008 2176 ntBASIC19.83■□□□□ 0.77
CCDC93Q567U6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 AL442647.2-201ENST00000429864 857 ntBASIC19.83■□□□□ 0.77
CCDC93Q567U6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC93Q567U6 RNA5SP412-201ENST00000516234 123 ntBASIC19.83■□□□□ 0.77
CCDC93Q567U6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC93Q567U6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC93Q567U6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC93Q567U6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC93Q567U6 AL391069.4-201ENST00000609583 481 ntBASIC19.83■□□□□ 0.77
CCDC93Q567U6 AL022328.1-201ENST00000610050 478 ntBASIC19.83■□□□□ 0.77
CCDC93Q567U6 CU634019.7-201ENST00000624153 1185 ntBASIC19.83■□□□□ 0.77
CCDC93Q567U6 FP236241.2-201ENST00000624906 1185 ntBASIC19.83■□□□□ 0.77
CCDC93Q567U6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC93Q567U6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC93Q567U6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC93Q567U6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CCDC93Q567U6 AC092068.3-201ENST00000587894 2016 ntBASIC19.83■□□□□ 0.76
CCDC93Q567U6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC93Q567U6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC93Q567U6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC93Q567U6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CCDC93Q567U6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC93Q567U6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 ACTG1P3-201ENST00000431775 1114 ntBASIC19.82■□□□□ 0.76
CCDC93Q567U6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 AC133539.2-201ENST00000604757 467 ntBASIC19.82■□□□□ 0.76
CCDC93Q567U6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 AL118508.1-201ENST00000613502 2345 ntBASIC19.82■□□□□ 0.76
CCDC93Q567U6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC93Q567U6 CYP4F24P-201ENST00000586049 1580 ntBASIC19.82■□□□□ 0.76
CCDC93Q567U6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC93Q567U6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.81■□□□□ 0.76
CCDC93Q567U6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 AP002490.2-201ENST00000524791 560 ntBASIC19.81■□□□□ 0.76
CCDC93Q567U6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 TDH-203ENST00000531764 1110 ntBASIC19.81■□□□□ 0.76
CCDC93Q567U6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC93Q567U6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC93Q567U6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms