Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 GPS2P2-201ENST00000430745 888 ntBASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AC015911.4-201ENST00000588022 1070 ntBASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AL603756.1-201ENST00000606511 2163 ntBASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AC007326.2-201ENST00000624224 7579 ntBASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM259Q4ZIN3 AC016027.1-202ENST00000607927 1699 ntBASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 AL512356.2-201ENST00000546955 174 ntBASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM259Q4ZIN3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 IGHV3-62-201ENST00000520057 340 ntBASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.64■□□□□ 0.25
TMEM259Q4ZIN3 AC013467.2-201ENST00000605472 835 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms