Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 AP3S2-216ENST00000617003 1561 ntBASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 HLA-H-201ENST00000383620 1096 ntBASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 HAUS4P1-201ENST00000406739 1145 ntBASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN20Q4JDL3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 AC004967.1-201ENST00000453589 447 ntBASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 AC024267.1-201ENST00000582320 895 ntBASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 AC004835.2-201ENST00000603762 682 ntBASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN20Q4JDL3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.08■□□□□ 0.33
PTPN20Q4JDL3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 AC254562.1-201ENST00000417586 456 ntBASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 RARRES2P9-201ENST00000565168 469 ntBASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms