Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC144BQ3MJ40 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 AC005052.1-201ENST00000625181 2492 ntBASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC144BQ3MJ40 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 AC023824.1-201ENST00000562945 2975 ntBASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC144BQ3MJ40 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 AC012645.4-201ENST00000610691 1061 ntBASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 AC063926.2-201ENST00000623766 1308 ntBASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC144BQ3MJ40 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms