Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 SOCS2P1-201ENST00000417727 557 ntBASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 AC008267.1-201ENST00000474858 1069 ntBASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 AP006547.1-201ENST00000563435 692 ntBASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 BRI3BPP1-201ENST00000594224 787 ntBASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 AL391069.4-201ENST00000609583 481 ntBASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 AC005695.3-201ENST00000614522 232 ntBASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO4Q2I0M5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 AC134915.1-201ENST00000426461 574 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 C2orf27AP3-201ENST00000434123 579 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 FTLP1-201ENST00000449155 526 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 AC106760.1-201ENST00000508690 800 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 AC097724.1-201ENST00000609581 426 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 AL354718.3-201ENST00000616414 581 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 CR382287.1-201ENST00000623954 586 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 AL158212.4-201ENST00000624062 1286 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 HLA-C-210ENST00000640219 976 ntBASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.63■□□□□ 0.09
RSPO4Q2I0M5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 AC012441.1-201ENST00000446669 685 ntBASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 MAGEA5-201ENST00000446757 942 ntBASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 FAM86LP-201ENST00000478302 853 ntBASIC15.62■□□□□ 0.09
RSPO4Q2I0M5 RN7SL818P-201ENST00000485099 259 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms