Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SOX4Q06945 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX4Q06945 AC004987.2-201ENST00000395959 1148 ntBASIC17.27■□□□□ 0.36
SOX4Q06945 AZGP1P1-201ENST00000411909 902 ntBASIC17.27■□□□□ 0.36
SOX4Q06945 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.27■□□□□ 0.36
SOX4Q06945 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.27■□□□□ 0.36
SOX4Q06945 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.27■□□□□ 0.36
SOX4Q06945 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.27■□□□□ 0.36
SOX4Q06945 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.27■□□□□ 0.36
SOX4Q06945 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.27■□□□□ 0.36
SOX4Q06945 SDHAP3-202ENST00000515467 728 ntBASIC17.27■□□□□ 0.36
SOX4Q06945 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX4Q06945 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SOX4Q06945 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX4Q06945 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX4Q06945 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOX4Q06945 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX4Q06945 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.27■□□□□ 0.36
SOX4Q06945 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX4Q06945 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SOX4Q06945 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.27■□□□□ 0.35
SOX4Q06945 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX4Q06945 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SOX4Q06945 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.27■□□□□ 0.35
SOX4Q06945 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 AC134407.2-201ENST00000625089 1978 ntBASIC17.26■□□□□ 0.35
SOX4Q06945 AC007541.1-201ENST00000570282 1469 ntBASIC17.26■□□□□ 0.35
SOX4Q06945 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SOX4Q06945 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SOX4Q06945 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 SPDYE19P-201ENST00000338590 713 ntBASIC17.26■□□□□ 0.35
SOX4Q06945 FO393414.2-201ENST00000405153 598 ntBASIC17.26■□□□□ 0.35
SOX4Q06945 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 API5-211ENST00000534695 560 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX4Q06945 AC243562.2-201ENST00000561247 970 ntBASIC17.26■□□□□ 0.35
SOX4Q06945 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.26■□□□□ 0.35
SOX4Q06945 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.26■□□□□ 0.35
SOX4Q06945 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.26■□□□□ 0.35
SOX4Q06945 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SOX4Q06945 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.26■□□□□ 0.35
SOX4Q06945 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
SOX4Q06945 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SOX4Q06945 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOX4Q06945 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX4Q06945 AC020916.1-201ENST00000587762 1774 ntBASIC17.25■□□□□ 0.35
SOX4Q06945 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SOX4Q06945 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX4Q06945 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.25■□□□□ 0.35
SOX4Q06945 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX4Q06945 KRT8P37-201ENST00000451609 1420 ntBASIC17.25■□□□□ 0.35
SOX4Q06945 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SOX4Q06945 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SOX4Q06945 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX4Q06945 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX4Q06945 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.25■□□□□ 0.35
SOX4Q06945 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX4Q06945 DOC2GP-202ENST00000514950 1163 ntBASIC17.25■□□□□ 0.35
SOX4Q06945 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.25■□□□□ 0.35
SOX4Q06945 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.25■□□□□ 0.35
SOX4Q06945 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.25■□□□□ 0.35
SOX4Q06945 SRD5A3P1-201ENST00000603021 949 ntBASIC17.25■□□□□ 0.35
SOX4Q06945 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.25■□□□□ 0.35
SOX4Q06945 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.25■□□□□ 0.35
SOX4Q06945 AC025048.6-201ENST00000634326 1161 ntBASIC17.25■□□□□ 0.35
SOX4Q06945 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SOX4Q06945 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.25■□□□□ 0.35
SOX4Q06945 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SOX4Q06945 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SOX4Q06945 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX4Q06945 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX4Q06945 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX4Q06945 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms