Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP1Q04837 AC023908.3-201ENST00000564211 3047 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP1Q04837 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP1Q04837 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SSBP1Q04837 POM121L3P-201ENST00000419331 1163 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 AL160237.2-201ENST00000556165 472 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
SSBP1Q04837 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 NTF6B-201ENST00000591913 560 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 LINC01023-201ENST00000606054 436 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SSBP1Q04837 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP1Q04837 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP1Q04837 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 PCDHA3-202ENST00000532566 4594 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 AC233702.3-201ENST00000578656 1387 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 AC026748.1-201ENST00000624349 3251 ntBASIC13.8□□□□□ -0.2
SSBP1Q04837 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP1Q04837 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP1Q04837 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP1Q04837 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 OR2I1P-209ENST00000641730 5365 ntBASIC13.79□□□□□ -0.2
SSBP1Q04837 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 CICP13-201ENST00000422015 2789 ntBASIC13.79□□□□□ -0.2
SSBP1Q04837 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SSBP1Q04837 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SSBP1Q04837 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP1Q04837 AK4P3-201ENST00000418260 669 ntBASIC13.79□□□□□ -0.2
SSBP1Q04837 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SSBP1Q04837 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP1Q04837 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP1Q04837 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 AC005363.2-201ENST00000618631 242 ntBASIC13.79□□□□□ -0.2
SSBP1Q04837 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 AC112693.3-201ENST00000624819 1983 ntBASIC13.79□□□□□ -0.2
SSBP1Q04837 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SSBP1Q04837 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSBP1Q04837 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP1Q04837 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms