Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.14□□□□□ -0.15
UBA52P62987 SLC25A1P3-201ENST00000395415 828 ntBASIC14.14□□□□□ -0.15
UBA52P62987 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.14□□□□□ -0.15
UBA52P62987 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UBA52P62987 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 AC073621.1-201ENST00000392730 636 ntBASIC14.13□□□□□ -0.15
UBA52P62987 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.13□□□□□ -0.15
UBA52P62987 AC096633.1-201ENST00000422446 749 ntBASIC14.13□□□□□ -0.15
UBA52P62987 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 PRYP5-201ENST00000451909 266 ntBASIC14.13□□□□□ -0.15
UBA52P62987 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.13□□□□□ -0.15
UBA52P62987 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.13□□□□□ -0.15
UBA52P62987 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.13□□□□□ -0.15
UBA52P62987 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 AD001527.2-201ENST00000622994 785 ntBASIC14.13□□□□□ -0.15
UBA52P62987 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBA52P62987 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBA52P62987 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
UBA52P62987 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.12□□□□□ -0.15
UBA52P62987 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBA52P62987 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms