Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH4P55283 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH4P55283 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH4P55283 AC006449.5-201ENST00000610658 2098 ntBASIC16.58■□□□□ 0.24
CDH4P55283 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDH4P55283 AC079328.2-201ENST00000561241 3354 ntBASIC16.58■□□□□ 0.24
CDH4P55283 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH4P55283 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CDH4P55283 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH4P55283 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH4P55283 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH4P55283 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH4P55283 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH4P55283 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 AL691432.1-201ENST00000596308 1422 ntBASIC16.57■□□□□ 0.24
CDH4P55283 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDH4P55283 MIR648-201ENST00000385046 94 ntBASIC16.57■□□□□ 0.24
CDH4P55283 SPDYE17-201ENST00000412399 783 ntBASIC16.57■□□□□ 0.24
CDH4P55283 BASP1P1-201ENST00000430708 665 ntBASIC16.57■□□□□ 0.24
CDH4P55283 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.57■□□□□ 0.24
CDH4P55283 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH4P55283 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH4P55283 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH4P55283 AC243562.2-201ENST00000561247 970 ntBASIC16.57■□□□□ 0.24
CDH4P55283 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH4P55283 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH4P55283 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDH4P55283 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.57■□□□□ 0.24
CDH4P55283 AL596087.1-201ENST00000400979 1969 ntBASIC16.57■□□□□ 0.24
CDH4P55283 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH4P55283 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH4P55283 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 AL136982.4-201ENST00000437689 1740 ntBASIC16.56■□□□□ 0.24
CDH4P55283 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDH4P55283 CYP4F24P-201ENST00000586049 1580 ntBASIC16.56■□□□□ 0.24
CDH4P55283 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CDH4P55283 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 RPL37AP1-201ENST00000412502 279 ntBASIC16.56■□□□□ 0.24
CDH4P55283 AC241585.1-201ENST00000433527 519 ntBASIC16.56■□□□□ 0.24
CDH4P55283 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 AC093214.1-201ENST00000511688 1107 ntBASIC16.56■□□□□ 0.24
CDH4P55283 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH4P55283 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.56■□□□□ 0.24
CDH4P55283 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDH4P55283 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH4P55283 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CDH4P55283 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms