Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 AC005593.1-201ENST00000624894 515 ntBASIC14.85□□□□□ -0.03
HMGA2P52926 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
HMGA2P52926 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGA2P52926 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGA2P52926 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HMGA2P52926 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGA2P52926 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMGA2P52926 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGA2P52926 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGA2P52926 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
HMGA2P52926 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HMGA2P52926 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGA2P52926 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HMGA2P52926 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGA2P52926 AC073648.2-201ENST00000510116 352 ntBASIC14.84□□□□□ -0.03
HMGA2P52926 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGA2P52926 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGA2P52926 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGA2P52926 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGA2P52926 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGA2P52926 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGA2P52926 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGA2P52926 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGA2P52926 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HMGA2P52926 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.83□□□□□ -0.03
HMGA2P52926 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGA2P52926 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGA2P52926 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
HMGA2P52926 AL589702.1-201ENST00000641229 1509 ntBASIC14.83□□□□□ -0.04
HMGA2P52926 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HMGA2P52926 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGA2P52926 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HMGA2P52926 AC092474.2-201ENST00000424288 719 ntBASIC14.83□□□□□ -0.04
HMGA2P52926 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGA2P52926 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGA2P52926 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGA2P52926 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGA2P52926 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
HMGA2P52926 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HMGA2P52926 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGA2P52926 AC112693.3-201ENST00000624819 1983 ntBASIC14.83□□□□□ -0.04
HMGA2P52926 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGA2P52926 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms