Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF144AP50876 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF144AP50876 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF144AP50876 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.2■□□□□ 0.02
RNF144AP50876 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF144AP50876 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 AL671883.3-201ENST00000603274 991 ntBASIC15.2■□□□□ 0.02
RNF144AP50876 AL596257.1-201ENST00000641463 2694 ntBASIC15.2■□□□□ 0.02
RNF144AP50876 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF144AP50876 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF144AP50876 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF144AP50876 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF144AP50876 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF144AP50876 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF144AP50876 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF144AP50876 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF144AP50876 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF144AP50876 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 MIR574-201ENST00000385209 96 ntBASIC15.19■□□□□ 0.02
RNF144AP50876 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
RNF144AP50876 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 PDPK2P-202ENST00000562415 1191 ntBASIC15.19■□□□□ 0.02
RNF144AP50876 AL009183.1-201ENST00000603760 355 ntBASIC15.19■□□□□ 0.02
RNF144AP50876 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF144AP50876 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF144AP50876 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 AC005622.1-201ENST00000636801 1703 ntBASIC15.19■□□□□ 0.02
RNF144AP50876 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF144AP50876 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF144AP50876 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF144AP50876 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF144AP50876 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RNF144AP50876 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.18■□□□□ 0.02
RNF144AP50876 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF144AP50876 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF144AP50876 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 AC006449.6-201ENST00000612330 2296 ntBASIC15.18■□□□□ 0.02
RNF144AP50876 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF144AP50876 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF144AP50876 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 AC074386.1-202ENST00000463561 864 ntBASIC15.18■□□□□ 0.02
RNF144AP50876 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.18■□□□□ 0.02
RNF144AP50876 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF144AP50876 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RNF144AP50876 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.18■□□□□ 0.02
RNF144AP50876 AC068137.2-201ENST00000605408 478 ntBASIC15.18■□□□□ 0.02
RNF144AP50876 AL078644.1-201ENST00000609881 752 ntBASIC15.18■□□□□ 0.02
RNF144AP50876 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms