Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CASP4P49662 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 UXT-AS1-201ENST00000590504 1525 ntBASIC17.73■□□□□ 0.43
CASP4P49662 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CASP4P49662 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.73■□□□□ 0.43
CASP4P49662 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.73■□□□□ 0.43
CASP4P49662 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.73■□□□□ 0.43
CASP4P49662 FAM58DP-201ENST00000428076 619 ntBASIC17.73■□□□□ 0.43
CASP4P49662 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.73■□□□□ 0.43
CASP4P49662 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.73■□□□□ 0.43
CASP4P49662 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.73■□□□□ 0.43
CASP4P49662 SLC25A39P2-201ENST00000537614 270 ntBASIC17.73■□□□□ 0.43
CASP4P49662 AC061975.2-201ENST00000581722 295 ntBASIC17.73■□□□□ 0.43
CASP4P49662 AL365330.1-201ENST00000607459 531 ntBASIC17.73■□□□□ 0.43
CASP4P49662 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.73■□□□□ 0.43
CASP4P49662 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.73■□□□□ 0.43
CASP4P49662 CROCCP1-201ENST00000426910 5675 ntBASIC17.73■□□□□ 0.43
CASP4P49662 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CASP4P49662 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.73■□□□□ 0.43
CASP4P49662 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.73■□□□□ 0.43
CASP4P49662 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASP4P49662 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.72■□□□□ 0.43
CASP4P49662 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CASP4P49662 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.72■□□□□ 0.43
CASP4P49662 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CASP4P49662 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.72■□□□□ 0.43
CASP4P49662 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.72■□□□□ 0.43
CASP4P49662 MIR1233-2-201ENST00000408138 82 ntBASIC17.72■□□□□ 0.43
CASP4P49662 MIR1233-1-201ENST00000408722 82 ntBASIC17.72■□□□□ 0.43
CASP4P49662 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 IGHV3-62-201ENST00000520057 340 ntBASIC17.72■□□□□ 0.43
CASP4P49662 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.72■□□□□ 0.43
CASP4P49662 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.72■□□□□ 0.43
CASP4P49662 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.72■□□□□ 0.43
CASP4P49662 AL596442.2-201ENST00000610240 980 ntBASIC17.72■□□□□ 0.43
CASP4P49662 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CASP4P49662 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 AP003680.1-201ENST00000598970 3660 ntBASIC17.72■□□□□ 0.43
CASP4P49662 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.72■□□□□ 0.43
CASP4P49662 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.72■□□□□ 0.43
CASP4P49662 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CASP4P49662 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CASP4P49662 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASP4P49662 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.71■□□□□ 0.43
CASP4P49662 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CASP4P49662 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.71■□□□□ 0.43
CASP4P49662 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.71■□□□□ 0.43
CASP4P49662 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.71■□□□□ 0.43
CASP4P49662 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CASP4P49662 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.71■□□□□ 0.43
CASP4P49662 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.71■□□□□ 0.43
CASP4P49662 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASP4P49662 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.71■□□□□ 0.43
CASP4P49662 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.71■□□□□ 0.43
CASP4P49662 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms