Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.23■□□□□ 0.19
CSNK1DP48730 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 AC011477.6-201ENST00000604980 1927 ntBASIC16.23■□□□□ 0.19
CSNK1DP48730 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.23■□□□□ 0.19
CSNK1DP48730 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 KRT8P37-201ENST00000451609 1420 ntBASIC16.23■□□□□ 0.19
CSNK1DP48730 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.23■□□□□ 0.19
CSNK1DP48730 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.23■□□□□ 0.19
CSNK1DP48730 TSSK5P-201ENST00000423978 907 ntBASIC16.23■□□□□ 0.19
CSNK1DP48730 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.23■□□□□ 0.19
CSNK1DP48730 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.23■□□□□ 0.19
CSNK1DP48730 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.23■□□□□ 0.19
CSNK1DP48730 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.23■□□□□ 0.19
CSNK1DP48730 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.23■□□□□ 0.19
CSNK1DP48730 IGHV3-42-201ENST00000520410 361 ntBASIC16.23■□□□□ 0.19
CSNK1DP48730 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.23■□□□□ 0.19
CSNK1DP48730 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 ZNF890P-202ENST00000530367 1156 ntBASIC16.23■□□□□ 0.19
CSNK1DP48730 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.23■□□□□ 0.19
CSNK1DP48730 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 AL662844.4-201ENST00000606367 2838 ntBASIC16.23■□□□□ 0.19
CSNK1DP48730 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
CSNK1DP48730 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.23■□□□□ 0.19
CSNK1DP48730 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSNK1DP48730 AC079328.2-201ENST00000561241 3354 ntBASIC16.23■□□□□ 0.19
CSNK1DP48730 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CSNK1DP48730 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.22■□□□□ 0.19
CSNK1DP48730 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.22■□□□□ 0.19
CSNK1DP48730 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.22■□□□□ 0.19
CSNK1DP48730 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.22■□□□□ 0.19
CSNK1DP48730 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CSNK1DP48730 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.22■□□□□ 0.19
CSNK1DP48730 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CSNK1DP48730 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.22■□□□□ 0.19
CSNK1DP48730 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.22■□□□□ 0.19
CSNK1DP48730 MIR6069-201ENST00000620069 79 ntBASIC16.22■□□□□ 0.19
CSNK1DP48730 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 AL033527.5-202ENST00000641632 1098 ntBASIC16.22■□□□□ 0.19
CSNK1DP48730 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CSNK1DP48730 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 AC069224.1-201ENST00000566372 1715 ntBASIC16.22■□□□□ 0.19
CSNK1DP48730 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.22■□□□□ 0.19
CSNK1DP48730 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSNK1DP48730 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms