Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 IGHV3-22-201ENST00000520721 359 ntBASIC14.78□□□□□ -0.04
APEX1P27695 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APEX1P27695 UNC93B6-202ENST00000528242 690 ntBASIC14.78□□□□□ -0.04
APEX1P27695 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.78□□□□□ -0.04
APEX1P27695 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.78□□□□□ -0.04
APEX1P27695 AC004790.2-201ENST00000623588 572 ntBASIC14.78□□□□□ -0.04
APEX1P27695 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.78□□□□□ -0.04
APEX1P27695 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APEX1P27695 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APEX1P27695 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.78□□□□□ -0.04
APEX1P27695 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APEX1P27695 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APEX1P27695 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APEX1P27695 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APEX1P27695 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.78□□□□□ -0.04
APEX1P27695 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APEX1P27695 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.78□□□□□ -0.04
APEX1P27695 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APEX1P27695 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APEX1P27695 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.78□□□□□ -0.04
APEX1P27695 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APEX1P27695 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.78□□□□□ -0.04
APEX1P27695 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 AC006058.4-201ENST00000624016 1670 ntBASIC14.77□□□□□ -0.04
APEX1P27695 LINC00895-201ENST00000629028 1637 ntBASIC14.77□□□□□ -0.04
APEX1P27695 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.77□□□□□ -0.04
APEX1P27695 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APEX1P27695 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APEX1P27695 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
APEX1P27695 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
APEX1P27695 MRPL20P1-201ENST00000400819 433 ntBASIC14.77□□□□□ -0.05
APEX1P27695 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 MIR1233-2-201ENST00000408138 82 ntBASIC14.77□□□□□ -0.05
APEX1P27695 MIR1233-1-201ENST00000408722 82 ntBASIC14.77□□□□□ -0.05
APEX1P27695 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.77□□□□□ -0.05
APEX1P27695 AC108751.1-201ENST00000490852 363 ntBASIC14.77□□□□□ -0.05
APEX1P27695 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.77□□□□□ -0.05
APEX1P27695 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.77□□□□□ -0.05
APEX1P27695 AC139530.3-201ENST00000620344 690 ntBASIC14.77□□□□□ -0.05
APEX1P27695 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.77□□□□□ -0.05
APEX1P27695 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
APEX1P27695 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
APEX1P27695 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
APEX1P27695 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APEX1P27695 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.77□□□□□ -0.05
APEX1P27695 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.76□□□□□ -0.05
APEX1P27695 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.76□□□□□ -0.05
APEX1P27695 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.76□□□□□ -0.05
APEX1P27695 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.76□□□□□ -0.05
APEX1P27695 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 BX842568.4-201ENST00000421222 227 ntBASIC14.76□□□□□ -0.05
APEX1P27695 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.76□□□□□ -0.05
APEX1P27695 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.76□□□□□ -0.05
APEX1P27695 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 MIR4751-201ENST00000578027 74 ntBASIC14.76□□□□□ -0.05
APEX1P27695 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APEX1P27695 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APEX1P27695 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms