Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NF1P21359 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NF1P21359 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NF1P21359 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.98□□□□□ -0.33
NF1P21359 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.98□□□□□ -0.33
NF1P21359 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.98□□□□□ -0.33
NF1P21359 COX5BP1-201ENST00000507622 393 ntBASIC12.98□□□□□ -0.33
NF1P21359 SCARNA21-201ENST00000517026 139 ntBASIC12.98□□□□□ -0.33
NF1P21359 AC024681.1-201ENST00000521917 487 ntBASIC12.98□□□□□ -0.33
NF1P21359 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.98□□□□□ -0.33
NF1P21359 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.98□□□□□ -0.33
NF1P21359 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NF1P21359 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.98□□□□□ -0.33
NF1P21359 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.98□□□□□ -0.33
NF1P21359 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.98□□□□□ -0.33
NF1P21359 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.98□□□□□ -0.33
NF1P21359 RN7SL8P-201ENST00000461771 266 ntBASIC12.98□□□□□ -0.33
NF1P21359 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.98□□□□□ -0.33
NF1P21359 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.98□□□□□ -0.33
NF1P21359 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.98□□□□□ -0.33
NF1P21359 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 AC120045.2-201ENST00000567334 178 ntBASIC12.98□□□□□ -0.33
NF1P21359 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.98□□□□□ -0.33
NF1P21359 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.98□□□□□ -0.33
NF1P21359 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NF1P21359 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.97□□□□□ -0.33
NF1P21359 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.97□□□□□ -0.33
NF1P21359 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.97□□□□□ -0.33
NF1P21359 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.97□□□□□ -0.33
NF1P21359 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 AC005252.2-201ENST00000624630 1141 ntBASIC12.97□□□□□ -0.33
NF1P21359 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 TOP3BP1-201ENST00000420768 1380 ntBASIC12.97□□□□□ -0.33
NF1P21359 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 AL589702.1-201ENST00000641229 1509 ntBASIC12.97□□□□□ -0.33
NF1P21359 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.97□□□□□ -0.33
NF1P21359 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.97□□□□□ -0.33
NF1P21359 AC012441.1-201ENST00000446669 685 ntBASIC12.97□□□□□ -0.33
NF1P21359 AC012618.1-201ENST00000461223 412 ntBASIC12.97□□□□□ -0.33
NF1P21359 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.97□□□□□ -0.33
NF1P21359 AC027139.1-201ENST00000565286 951 ntBASIC12.97□□□□□ -0.33
NF1P21359 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NF1P21359 UBALD1-205ENST00000590891 2641 ntBASIC12.97□□□□□ -0.33
NF1P21359 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.97□□□□□ -0.33
NF1P21359 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.97□□□□□ -0.33
NF1P21359 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms