Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT4P19013 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT4P19013 AC006486.2-201ENST00000624246 2199 ntBASIC16.4■□□□□ 0.22
KRT4P19013 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT4P19013 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT4P19013 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT4P19013 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT4P19013 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.39■□□□□ 0.22
KRT4P19013 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT4P19013 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT4P19013 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.39■□□□□ 0.22
KRT4P19013 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
KRT4P19013 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.39■□□□□ 0.22
KRT4P19013 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT4P19013 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT4P19013 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KRT4P19013 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.39■□□□□ 0.21
KRT4P19013 AL049597.2-201ENST00000565575 961 ntBASIC16.39■□□□□ 0.21
KRT4P19013 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.39■□□□□ 0.21
KRT4P19013 MTDHP3-201ENST00000594186 672 ntBASIC16.39■□□□□ 0.21
KRT4P19013 AC092119.3-201ENST00000612618 583 ntBASIC16.39■□□□□ 0.21
KRT4P19013 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
KRT4P19013 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT4P19013 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KRT4P19013 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KRT4P19013 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT4P19013 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.39■□□□□ 0.21
KRT4P19013 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT4P19013 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 AC008677.1-201ENST00000519230 1561 ntBASIC16.38■□□□□ 0.21
KRT4P19013 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT4P19013 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KRT4P19013 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KRT4P19013 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT4P19013 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT4P19013 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT4P19013 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
KRT4P19013 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT4P19013 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 ARMC10P1-201ENST00000313754 855 ntBASIC16.38■□□□□ 0.21
KRT4P19013 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT4P19013 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KRT4P19013 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT4P19013 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT4P19013 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT4P19013 MTDHP4-201ENST00000600287 670 ntBASIC16.38■□□□□ 0.21
KRT4P19013 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT4P19013 AL805961.1-202ENST00000641562 540 ntBASIC16.38■□□□□ 0.21
KRT4P19013 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
KRT4P19013 AC126755.1-201ENST00000525846 6405 ntBASIC16.38■□□□□ 0.21
KRT4P19013 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 AC006504.4-201ENST00000592118 1568 ntBASIC16.38■□□□□ 0.21
KRT4P19013 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT4P19013 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms