Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.28■□□□□ 0.2
XRCC1P18887 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
XRCC1P18887 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.28■□□□□ 0.2
XRCC1P18887 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
XRCC1P18887 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
XRCC1P18887 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XRCC1P18887 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
XRCC1P18887 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.27■□□□□ 0.2
XRCC1P18887 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
XRCC1P18887 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 LINC00895-201ENST00000629028 1637 ntBASIC16.27■□□□□ 0.2
XRCC1P18887 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.27■□□□□ 0.2
XRCC1P18887 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
XRCC1P18887 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
XRCC1P18887 AC079140.1-201ENST00000508039 487 ntBASIC16.27■□□□□ 0.2
XRCC1P18887 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
XRCC1P18887 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
XRCC1P18887 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 AC027612.4-201ENST00000605371 583 ntBASIC16.27■□□□□ 0.2
XRCC1P18887 AC021097.1-201ENST00000607902 574 ntBASIC16.27■□□□□ 0.2
XRCC1P18887 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.27■□□□□ 0.2
XRCC1P18887 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
XRCC1P18887 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
XRCC1P18887 ME2P1-201ENST00000426028 1970 ntBASIC16.27■□□□□ 0.19
XRCC1P18887 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
XRCC1P18887 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
XRCC1P18887 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.27■□□□□ 0.19
XRCC1P18887 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.27■□□□□ 0.19
XRCC1P18887 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
XRCC1P18887 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.27■□□□□ 0.19
XRCC1P18887 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
XRCC1P18887 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
XRCC1P18887 WASH6P-202ENST00000359512 1437 ntBASIC16.27■□□□□ 0.19
XRCC1P18887 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.27■□□□□ 0.19
XRCC1P18887 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
XRCC1P18887 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
XRCC1P18887 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.26■□□□□ 0.19
XRCC1P18887 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC1P18887 METTL21AP1-201ENST00000438852 635 ntBASIC16.26■□□□□ 0.19
XRCC1P18887 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.26■□□□□ 0.19
XRCC1P18887 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.26■□□□□ 0.19
XRCC1P18887 AP002490.2-201ENST00000524791 560 ntBASIC16.26■□□□□ 0.19
XRCC1P18887 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.26■□□□□ 0.19
XRCC1P18887 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.26■□□□□ 0.19
XRCC1P18887 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
XRCC1P18887 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.26■□□□□ 0.19
XRCC1P18887 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
XRCC1P18887 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.26■□□□□ 0.19
XRCC1P18887 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms