Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.75■□□□□ 0.27
ERCC2P18074 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.75■□□□□ 0.27
ERCC2P18074 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC2P18074 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ERCC2P18074 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC2P18074 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC2P18074 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
ERCC2P18074 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 AC008741.2-201ENST00000612792 3115 ntBASIC16.74■□□□□ 0.27
ERCC2P18074 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 FAM220BP-201ENST00000377689 816 ntBASIC16.74■□□□□ 0.27
ERCC2P18074 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 AL627223.1-201ENST00000416693 442 ntBASIC16.74■□□□□ 0.27
ERCC2P18074 FAM58DP-201ENST00000428076 619 ntBASIC16.74■□□□□ 0.27
ERCC2P18074 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.74■□□□□ 0.27
ERCC2P18074 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 AC061975.2-201ENST00000581722 295 ntBASIC16.74■□□□□ 0.27
ERCC2P18074 AC004835.2-201ENST00000603762 682 ntBASIC16.74■□□□□ 0.27
ERCC2P18074 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC2P18074 AC010491.1-201ENST00000563101 2797 ntBASIC16.74■□□□□ 0.27
ERCC2P18074 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.74■□□□□ 0.27
ERCC2P18074 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
ERCC2P18074 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ERCC2P18074 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
ERCC2P18074 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 AC245100.5-201ENST00000452108 331 ntBASIC16.73■□□□□ 0.27
ERCC2P18074 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.73■□□□□ 0.27
ERCC2P18074 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 AC024267.1-201ENST00000582320 895 ntBASIC16.73■□□□□ 0.27
ERCC2P18074 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
ERCC2P18074 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ERCC2P18074 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
ERCC2P18074 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ERCC2P18074 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC2P18074 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 AP3S2-216ENST00000617003 1561 ntBASIC16.72■□□□□ 0.27
ERCC2P18074 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC2P18074 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.72■□□□□ 0.27
ERCC2P18074 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ERCC2P18074 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC2P18074 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.72■□□□□ 0.27
ERCC2P18074 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.72■□□□□ 0.27
ERCC2P18074 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ERCC2P18074 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms