Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DOBP13765 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DOBP13765 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DOBP13765 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DOBP13765 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DOBP13765 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DOBP13765 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DOBP13765 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DOBP13765 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 ADH5P3-201ENST00000433842 1137 ntBASIC14.6□□□□□ -0.07
HLA-DOBP13765 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 C20orf181-201ENST00000623918 480 ntBASIC14.6□□□□□ -0.07
HLA-DOBP13765 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 AL589702.1-201ENST00000641229 1509 ntBASIC14.6□□□□□ -0.07
HLA-DOBP13765 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DOBP13765 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DOBP13765 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 MTDHP5-201ENST00000598980 586 ntBASIC14.59□□□□□ -0.07
HLA-DOBP13765 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DOBP13765 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DOBP13765 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms