Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.67■□□□□ 0.58
BMP3P12645 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
BMP3P12645 SPDYE19P-201ENST00000338590 713 ntBASIC18.67■□□□□ 0.58
BMP3P12645 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.67■□□□□ 0.58
BMP3P12645 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.67■□□□□ 0.58
BMP3P12645 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.67■□□□□ 0.58
BMP3P12645 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.67■□□□□ 0.58
BMP3P12645 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
BMP3P12645 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.67■□□□□ 0.58
BMP3P12645 AC243562.2-201ENST00000561247 970 ntBASIC18.67■□□□□ 0.58
BMP3P12645 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.67■□□□□ 0.58
BMP3P12645 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
BMP3P12645 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BMP3P12645 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.67■□□□□ 0.58
BMP3P12645 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
BMP3P12645 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.67■□□□□ 0.58
BMP3P12645 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.67■□□□□ 0.58
BMP3P12645 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.67■□□□□ 0.58
BMP3P12645 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.66■□□□□ 0.58
BMP3P12645 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BMP3P12645 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.66■□□□□ 0.58
BMP3P12645 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BMP3P12645 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
BMP3P12645 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.66■□□□□ 0.58
BMP3P12645 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.66■□□□□ 0.58
BMP3P12645 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 TP53TG3HP-202ENST00000569755 579 ntBASIC18.66■□□□□ 0.58
BMP3P12645 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.66■□□□□ 0.58
BMP3P12645 SRD5A3P1-201ENST00000603021 949 ntBASIC18.66■□□□□ 0.58
BMP3P12645 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.66■□□□□ 0.58
BMP3P12645 AL358472.5-202ENST00000641448 1267 ntBASIC18.66■□□□□ 0.58
BMP3P12645 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 AC063926.2-201ENST00000623766 1308 ntBASIC18.66■□□□□ 0.58
BMP3P12645 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
BMP3P12645 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.66■□□□□ 0.58
BMP3P12645 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP3P12645 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
BMP3P12645 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BMP3P12645 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.65■□□□□ 0.58
BMP3P12645 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 DFFBP1-201ENST00000433250 979 ntBASIC18.65■□□□□ 0.58
BMP3P12645 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.65■□□□□ 0.58
BMP3P12645 AC025048.3-201ENST00000590609 569 ntBASIC18.65■□□□□ 0.58
BMP3P12645 AC005702.4-201ENST00000618393 416 ntBASIC18.65■□□□□ 0.58
BMP3P12645 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.65■□□□□ 0.58
BMP3P12645 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.65■□□□□ 0.58
BMP3P12645 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
BMP3P12645 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.65■□□□□ 0.58
BMP3P12645 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BMP3P12645 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.65■□□□□ 0.58
BMP3P12645 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BMP3P12645 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
BMP3P12645 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.64■□□□□ 0.58
BMP3P12645 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
BMP3P12645 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.64■□□□□ 0.58
BMP3P12645 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
BMP3P12645 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BMP3P12645 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.64■□□□□ 0.57
BMP3P12645 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BMP3P12645 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.64■□□□□ 0.57
BMP3P12645 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.64■□□□□ 0.57
BMP3P12645 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms