Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 PCGF3-213ENST00000620529 1899 ntBASIC15.78■□□□□ 0.12
SP9P0CG40 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.78■□□□□ 0.12
SP9P0CG40 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 MIR1202-201ENST00000408529 83 ntBASIC15.78■□□□□ 0.12
SP9P0CG40 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.78■□□□□ 0.12
SP9P0CG40 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.78■□□□□ 0.12
SP9P0CG40 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.78■□□□□ 0.12
SP9P0CG40 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.78■□□□□ 0.12
SP9P0CG40 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.78■□□□□ 0.12
SP9P0CG40 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.78■□□□□ 0.12
SP9P0CG40 AC243562.2-201ENST00000561247 970 ntBASIC15.78■□□□□ 0.12
SP9P0CG40 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.78■□□□□ 0.12
SP9P0CG40 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 AC097724.1-201ENST00000609581 426 ntBASIC15.78■□□□□ 0.12
SP9P0CG40 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.78■□□□□ 0.12
SP9P0CG40 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.78■□□□□ 0.12
SP9P0CG40 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SP9P0CG40 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 AC135050.7-201ENST00000624508 2218 ntBASIC15.78■□□□□ 0.12
SP9P0CG40 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SP9P0CG40 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.78■□□□□ 0.12
SP9P0CG40 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.77■□□□□ 0.12
SP9P0CG40 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.77■□□□□ 0.12
SP9P0CG40 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.77■□□□□ 0.12
SP9P0CG40 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.77■□□□□ 0.12
SP9P0CG40 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
SP9P0CG40 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
SP9P0CG40 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SP9P0CG40 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.77■□□□□ 0.12
SP9P0CG40 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.77■□□□□ 0.12
SP9P0CG40 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.77■□□□□ 0.12
SP9P0CG40 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.77■□□□□ 0.12
SP9P0CG40 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.77■□□□□ 0.12
SP9P0CG40 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.77■□□□□ 0.12
SP9P0CG40 SLED1-202ENST00000512051 380 ntBASIC15.77■□□□□ 0.12
SP9P0CG40 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.77■□□□□ 0.12
SP9P0CG40 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SP9P0CG40 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SP9P0CG40 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.77■□□□□ 0.12
SP9P0CG40 AL451050.2-201ENST00000606967 682 ntBASIC15.77■□□□□ 0.12
SP9P0CG40 AC091812.3-201ENST00000621362 345 ntBASIC15.77■□□□□ 0.12
SP9P0CG40 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SP9P0CG40 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
SP9P0CG40 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SP9P0CG40 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SP9P0CG40 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SP9P0CG40 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.77■□□□□ 0.11
SP9P0CG40 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SP9P0CG40 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SP9P0CG40 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SP9P0CG40 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.76■□□□□ 0.11
SP9P0CG40 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
SP9P0CG40 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.76■□□□□ 0.11
SP9P0CG40 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.76■□□□□ 0.11
SP9P0CG40 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.76■□□□□ 0.11
SP9P0CG40 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.76■□□□□ 0.11
SP9P0CG40 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SP9P0CG40 AL645728.1-201ENST00000366221 2101 ntBASIC15.76■□□□□ 0.11
SP9P0CG40 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.76■□□□□ 0.11
SP9P0CG40 AC092978.1-202ENST00000637590 1327 ntBASIC15.76■□□□□ 0.11
SP9P0CG40 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SP9P0CG40 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SP9P0CG40 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SP9P0CG40 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms