Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC116407.4-201ENST00000623319 1061 ntBASIC13.57□□□□□ -0.24
CTSDP07339 AL358472.4-201ENST00000633140 710 ntBASIC13.57□□□□□ -0.24
CTSDP07339 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 AP000550.4-202ENST00000639755 178 ntBASIC13.57□□□□□ -0.24
CTSDP07339 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.57□□□□□ -0.24
CTSDP07339 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CTSDP07339 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.57□□□□□ -0.24
CTSDP07339 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 PI4KAP1-204ENST00000612579 1703 ntBASIC13.56□□□□□ -0.24
CTSDP07339 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.56□□□□□ -0.24
CTSDP07339 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.56□□□□□ -0.24
CTSDP07339 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.56□□□□□ -0.24
CTSDP07339 SLC25A6P2-201ENST00000497974 877 ntBASIC13.56□□□□□ -0.24
CTSDP07339 AC104819.1-201ENST00000504587 486 ntBASIC13.56□□□□□ -0.24
CTSDP07339 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.56□□□□□ -0.24
CTSDP07339 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 AP002414.4-201ENST00000589764 1148 ntBASIC13.56□□□□□ -0.24
CTSDP07339 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CTSDP07339 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSDP07339 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSDP07339 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.55□□□□□ -0.24
CTSDP07339 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSDP07339 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSDP07339 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms