Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
APPP05067 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
APPP05067 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.56■□□□□ 0.72
APPP05067 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
APPP05067 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.55■□□□□ 0.72
APPP05067 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APPP05067 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.55■□□□□ 0.72
APPP05067 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
APPP05067 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APPP05067 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.55■□□□□ 0.72
APPP05067 HLA-H-201ENST00000383620 1096 ntBASIC19.55■□□□□ 0.72
APPP05067 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 AL645939.2-201ENST00000427340 991 ntBASIC19.55■□□□□ 0.72
APPP05067 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.55■□□□□ 0.72
APPP05067 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.55■□□□□ 0.72
APPP05067 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.55■□□□□ 0.72
APPP05067 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.55■□□□□ 0.72
APPP05067 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APPP05067 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.55■□□□□ 0.72
APPP05067 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.55■□□□□ 0.72
APPP05067 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
APPP05067 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APPP05067 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
APPP05067 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
APPP05067 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APPP05067 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.54■□□□□ 0.72
APPP05067 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
APPP05067 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.54■□□□□ 0.72
APPP05067 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.54■□□□□ 0.72
APPP05067 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.54■□□□□ 0.72
APPP05067 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
APPP05067 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
APPP05067 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.54■□□□□ 0.72
APPP05067 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.54■□□□□ 0.72
APPP05067 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.54■□□□□ 0.72
APPP05067 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.54■□□□□ 0.72
APPP05067 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.54■□□□□ 0.72
APPP05067 AC003101.2-201ENST00000612557 442 ntBASIC19.54■□□□□ 0.72
APPP05067 MIR6080-201ENST00000617359 66 ntBASIC19.54■□□□□ 0.72
APPP05067 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.54■□□□□ 0.72
APPP05067 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
APPP05067 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APPP05067 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.54■□□□□ 0.72
APPP05067 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
APPP05067 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.54■□□□□ 0.72
APPP05067 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.53■□□□□ 0.72
APPP05067 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 AC008677.1-201ENST00000519230 1561 ntBASIC19.53■□□□□ 0.72
APPP05067 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
APPP05067 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
APPP05067 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
APPP05067 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
APPP05067 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.53■□□□□ 0.72
APPP05067 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.53■□□□□ 0.72
APPP05067 AC027796.2-201ENST00000575326 344 ntBASIC19.53■□□□□ 0.72
APPP05067 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.53■□□□□ 0.72
APPP05067 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.53■□□□□ 0.72
APPP05067 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.53■□□□□ 0.72
APPP05067 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APPP05067 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.53■□□□□ 0.72
APPP05067 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
APPP05067 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms