Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 RPS2P1-201ENST00000434010 821 ntBASIC14.71□□□□□ -0.05
HLA-DPB1P04440 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.71□□□□□ -0.05
HLA-DPB1P04440 AC025062.2-201ENST00000605477 670 ntBASIC14.71□□□□□ -0.05
HLA-DPB1P04440 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 PPT1-215ENST00000641471 2368 ntBASIC14.71□□□□□ -0.05
HLA-DPB1P04440 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
HLA-DPB1P04440 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPB1P04440 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DPB1P04440 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
HLA-DPB1P04440 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 NCF1C-201ENST00000438382 1427 ntBASIC14.7□□□□□ -0.06
HLA-DPB1P04440 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 RNPS1P1-201ENST00000507437 918 ntBASIC14.7□□□□□ -0.06
HLA-DPB1P04440 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 AC073648.2-201ENST00000510116 352 ntBASIC14.7□□□□□ -0.06
HLA-DPB1P04440 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 SNX33P1-201ENST00000592116 1762 ntBASIC14.7□□□□□ -0.06
HLA-DPB1P04440 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DPB1P04440 FAM45BP-202ENST00000592932 1624 ntBASIC14.7□□□□□ -0.06
HLA-DPB1P04440 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPB1P04440 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms