Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC9.92□□□□□ -0.82
APOBP04114 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC9.92□□□□□ -0.82
APOBP04114 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 RN7SL181P-201ENST00000462921 277 ntBASIC9.92□□□□□ -0.82
APOBP04114 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC9.92□□□□□ -0.82
APOBP04114 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC9.92□□□□□ -0.82
APOBP04114 AC073352.2-201ENST00000609385 439 ntBASIC9.92□□□□□ -0.82
APOBP04114 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
APOBP04114 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC9.92□□□□□ -0.82
APOBP04114 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 HSPB1P2-201ENST00000448722 546 ntBASIC9.92□□□□□ -0.82
APOBP04114 FTLP1-201ENST00000449155 526 ntBASIC9.92□□□□□ -0.82
APOBP04114 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
APOBP04114 RNA5SP486-201ENST00000515961 83 ntBASIC9.92□□□□□ -0.82
APOBP04114 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
APOBP04114 PRSS30P-206ENST00000641773 873 ntBASIC9.92□□□□□ -0.82
APOBP04114 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC9.92□□□□□ -0.82
APOBP04114 AC018892.3-201ENST00000623986 2499 ntBASIC9.91□□□□□ -0.82
APOBP04114 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
APOBP04114 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC9.91□□□□□ -0.82
APOBP04114 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC9.91□□□□□ -0.82
APOBP04114 SLED1-202ENST00000512051 380 ntBASIC9.91□□□□□ -0.82
APOBP04114 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC9.91□□□□□ -0.82
APOBP04114 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC9.91□□□□□ -0.82
APOBP04114 AC134043.2-201ENST00000624206 2238 ntBASIC9.91□□□□□ -0.82
APOBP04114 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 PGGT1BP2-201ENST00000398621 1028 ntBASIC9.91□□□□□ -0.82
APOBP04114 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC9.91□□□□□ -0.82
APOBP04114 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC9.91□□□□□ -0.82
APOBP04114 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 CENPX-208ENST00000584347 799 ntTSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC9.91□□□□□ -0.82
APOBP04114 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC9.91□□□□□ -0.82
APOBP04114 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
APOBP04114 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
APOBP04114 LETM1P2-201ENST00000597330 2178 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms