Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMP1P01033 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TIMP1P01033 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TIMP1P01033 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMP1P01033 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMP1P01033 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMP1P01033 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.35■□□□□ 0.37
TIMP1P01033 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMP1P01033 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TIMP1P01033 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMP1P01033 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMP1P01033 AC244452.3-201ENST00000636814 210 ntBASIC17.35■□□□□ 0.37
TIMP1P01033 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMP1P01033 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TIMP1P01033 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP1P01033 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.35■□□□□ 0.37
TIMP1P01033 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMP1P01033 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TIMP1P01033 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP1P01033 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP1P01033 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP1P01033 Z93015.1-201ENST00000451718 390 ntBASIC17.34■□□□□ 0.37
TIMP1P01033 AC245100.5-201ENST00000452108 331 ntBASIC17.34■□□□□ 0.37
TIMP1P01033 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP1P01033 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP1P01033 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.34■□□□□ 0.37
TIMP1P01033 AC022137.2-201ENST00000503482 481 ntBASIC17.34■□□□□ 0.37
TIMP1P01033 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TIMP1P01033 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.34■□□□□ 0.37
TIMP1P01033 SLED1-202ENST00000512051 380 ntBASIC17.34■□□□□ 0.37
TIMP1P01033 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP1P01033 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMP1P01033 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMP1P01033 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.34■□□□□ 0.37
TIMP1P01033 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMP1P01033 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMP1P01033 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP1P01033 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP1P01033 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.33■□□□□ 0.37
TIMP1P01033 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TIMP1P01033 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP1P01033 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP1P01033 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP1P01033 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TIMP1P01033 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
TIMP1P01033 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TIMP1P01033 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.33■□□□□ 0.36
TIMP1P01033 AKR7A2P1-201ENST00000460134 915 ntBASIC17.33■□□□□ 0.36
TIMP1P01033 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.33■□□□□ 0.36
TIMP1P01033 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.33■□□□□ 0.36
TIMP1P01033 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
TIMP1P01033 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP1P01033 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.33■□□□□ 0.36
TIMP1P01033 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 GGT3P-204ENST00000453783 1664 ntBASIC17.32■□□□□ 0.36
TIMP1P01033 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 BNIP3P1-202ENST00000550043 1585 ntBASIC17.32■□□□□ 0.36
TIMP1P01033 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TIMP1P01033 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP1P01033 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP1P01033 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TIMP1P01033 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.32■□□□□ 0.36
TIMP1P01033 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms