Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 MIR4722-201ENST00000578292 60 ntBASIC18.32■□□□□ 0.52
ALDH1A1P00352 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.32■□□□□ 0.52
ALDH1A1P00352 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 AC092068.3-201ENST00000587894 2016 ntBASIC18.32■□□□□ 0.52
ALDH1A1P00352 LINC01144-201ENST00000626198 1710 ntBASIC18.32■□□□□ 0.52
ALDH1A1P00352 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A1P00352 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 AHCYP2-201ENST00000430630 1300 ntBASIC18.31■□□□□ 0.52
ALDH1A1P00352 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 RN7SL769P-201ENST00000469386 295 ntBASIC18.31■□□□□ 0.52
ALDH1A1P00352 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 AC005695.3-201ENST00000614522 232 ntBASIC18.31■□□□□ 0.52
ALDH1A1P00352 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
ALDH1A1P00352 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A1P00352 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A1P00352 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 AC253536.4-201ENST00000440539 267 ntBASIC18.3■□□□□ 0.52
ALDH1A1P00352 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 MIR3619-201ENST00000579667 83 ntBASIC18.3■□□□□ 0.52
ALDH1A1P00352 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
ALDH1A1P00352 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms