Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15□□□□□ -0.01
NKX2-2O95096 AC007950.2-201ENST00000615045 2347 ntBASIC15□□□□□ -0.01
NKX2-2O95096 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 AP3S2-216ENST00000617003 1561 ntBASIC14.99□□□□□ -0.01
NKX2-2O95096 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX2-2O95096 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 AC005237.2-201ENST00000434368 219 ntBASIC14.99□□□□□ -0.01
NKX2-2O95096 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX2-2O95096 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.99□□□□□ -0.01
NKX2-2O95096 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.99□□□□□ -0.01
NKX2-2O95096 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.99□□□□□ -0.01
NKX2-2O95096 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX2-2O95096 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX2-2O95096 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 AC008894.3-201ENST00000624324 3103 ntBASIC14.99□□□□□ -0.01
NKX2-2O95096 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-2O95096 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.99□□□□□ -0.01
NKX2-2O95096 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NKX2-2O95096 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NKX2-2O95096 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-2O95096 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.98□□□□□ -0.01
NKX2-2O95096 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC211486.1-202ENST00000416371 468 ntBASIC14.98□□□□□ -0.01
NKX2-2O95096 AL627223.1-201ENST00000416693 442 ntBASIC14.98□□□□□ -0.01
NKX2-2O95096 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC211476.1-201ENST00000503899 468 ntBASIC14.98□□□□□ -0.01
NKX2-2O95096 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
NKX2-2O95096 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC093520.2-201ENST00000561830 333 ntBASIC14.98□□□□□ -0.01
NKX2-2O95096 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
NKX2-2O95096 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 AC004835.2-201ENST00000603762 682 ntBASIC14.98□□□□□ -0.01
NKX2-2O95096 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NKX2-2O95096 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-2O95096 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-2O95096 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NKX2-2O95096 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms