Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
ZNF253O75346 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF253O75346 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF253O75346 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
ZNF253O75346 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF253O75346 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF253O75346 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF253O75346 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF253O75346 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ZNF253O75346 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF253O75346 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.77□□□□□ -0.37
ZNF253O75346 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF253O75346 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ZNF253O75346 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
ZNF253O75346 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF253O75346 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 MIR5100-201ENST00000579544 119 ntBASIC12.76□□□□□ -0.37
ZNF253O75346 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF253O75346 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF253O75346 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF253O75346 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF253O75346 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.75□□□□□ -0.37
ZNF253O75346 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.75□□□□□ -0.37
ZNF253O75346 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 PCED1CP-201ENST00000419887 785 ntBASIC12.75□□□□□ -0.37
ZNF253O75346 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF253O75346 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF253O75346 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms